The detailed information of tRNA gene sequence


Sequence ID>SRA1001798
Genome IDSRR001308.59419
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 125
End posion on genome 201
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtacatttga
tRNA gene sequence 
CGCGGGGTAGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTTGGTTCAAA
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
agttcttatt
Secondary structure (Cloverleaf model)
>SRA1001798	Met	CAT
                   a      ACCA agttcttatt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        A      | + | | |     A
    C       C G A G       G T T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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