The detailed information of tRNA gene sequence


Sequence ID>SRA1001800
Genome IDSRR001308.60424
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 86
End posion on genome 162
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ccaggtttcg
tRNA gene sequence 
GCGCCTGTAGCTCAACCGGATAGAGCACCGGCCTTCTAAGCCGGCGGTTGCAGGTTCGAG
TCCTGTCGGGCGCGCCA
Downstream region at tRNA end position 
ccggagtagt
Secondary structure (Cloverleaf model)
>SRA1001800	Arg	TCT
                   g      GCCA ccggagtagt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     T G T C C     A
      C A A        A      + | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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