The detailed information of tRNA gene sequence


Sequence ID>SRA1001815
Genome IDSRR001308.68471
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 153
End posion on genome 77
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
aaaaacacaT
tRNA gene sequence 
GGCCTCGTAGTACAATGGATAGTATAAGAGTTTCCGAAGCTCCAGATCCTGGTTCGATTC
CAGGCGAGGCCACCC
Downstream region at tRNA end position 
Acattattct
Secondary structure (Cloverleaf model)
>SRA1001815	Arg	CCG
                   T      ACCC Acattattct
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     G G A C C     A
      T A A        A      | | | | |     G
    G       C A T G       C C T G G     C
    G       | | | +                 T T
    A       G T A T
      T A          A     AGAT
                    A   C
                    G - C
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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