The detailed information of tRNA gene sequence


Sequence ID>SRA1001816
Genome IDSRR001308.68956
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 192
End posion on genome 118
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tggcctcatc
tRNA gene sequence 
GCCCGAGTAGCTCAGTGGAAGAGCAGCGCCCTTCTAAGGCGAAGGTCACAGGTTCGATCC
CTGTCTCGGGCACCA
Downstream region at tRNA end position 
ttaatagttc
Secondary structure (Cloverleaf model)
>SRA1001816	Arg	TCT
                   c      ACCA ttaatagttc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     G
      T     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        A A        A     AGGTC
                    G   A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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