The detailed information of tRNA gene sequence


Sequence ID>SRA1001817
Genome IDSRR001308.69686
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 236
End posion on genome 161
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gaagccgcgc
tRNA gene sequence 
GCCGGCTTAGCTCAGTTGGTAGAGCACCTGATTTGTAATCAGGGGGCCACGGGTTCGAAT
CCTGTAGCCGGCACCA
Downstream region at tRNA end position 
taatttatcc
Secondary structure (Cloverleaf model)
>SRA1001817	Thr	TGT
                   c      ACCA taatttatcc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     T G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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