The detailed information of tRNA gene sequence


Sequence ID>SRA1001822
Genome IDSRR001308.72523
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 132
End posion on genome 205
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccgctctttT
tRNA gene sequence 
CGGGGTATAGTGAAGCGGTATCGCGCCTGTTTTGGGAACAGGAGATCGCCAGTTCGATCC
TGGCTACCCCGATtt
Downstream region at tRNA end position 
gtttctagct
Secondary structure (Cloverleaf model)
>SRA1001822	Pro	TGG
                   T      ATtt gtttctagct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          C T
                    T     C G G T C     A
        G A        A      | | | | |     G
      C     A G T G       G C C A G     C
      G     | | + |                 T T
      G     T C G C
        T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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