The detailed information of tRNA gene sequence


Sequence ID>SRA1001824
Genome IDSRR001308.74420
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 19
End posion on genome 105
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gacgcgcgct
tRNA gene sequence 
TGGGGAATGTCCCGAGTGGCAAAGGGGGCGGACTGTAAATCCGCTGCTGTAATGGCTTCG
TAGGTTCGAGTCCTACTTCCCCCACCA
Downstream region at tRNA end position 
cgcgccgtcc
Secondary structure (Cloverleaf model)
>SRA1001824	Tyr	GTA
                   t      ACCA cgcgccgtcc
                     T   C
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     C A T C C     A
      G A G        G      | | | | |     G
    T       C C C T       G T A G G     C
    G         | | +                 T T
    G       A G G G
      C A A        G     TGCTGTAATGGCTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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