The detailed information of tRNA gene sequence


Sequence ID>SRA1001829
Genome IDSRR001308.77573
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 167
End posion on genome 242
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cgcgtccctc
tRNA gene sequence 
GCCGGAATAGCTCAGTTGGTAGAGCGGCGCATTCGTAATGCGTAGGTCGCAGGTTCGACT
CCTGTTTCCGGCACCA
Downstream region at tRNA end position 
gcgnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001829	Thr	CGT
                   c      ACCA gcgnnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T C
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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