The detailed information of tRNA gene sequence


Sequence ID>SRA1001831
Genome IDSRR001308.77886
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 82
End posion on genome 156
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tacatattca
tRNA gene sequence 
GGGCGGTTAGCTCAGGGGTAGAGCACTGCATTCACACTGCAGGGGTCACAAGTTCGAAAC
TTGTACTGCCCACCA
Downstream region at tRNA end position 
agattggcct
Secondary structure (Cloverleaf model)
>SRA1001831	Val	CAC
                   a      ACCA agattggcct
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     T - A          A A
                    T     T G T T C     A
        G A        A      | | | | |     G
      G     C T C G       A C A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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