The detailed information of tRNA gene sequence


Sequence ID>SRA1001832
Genome IDSRR001308.78110
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 128
End posion on genome 204
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttcctttgtt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGGGGTCGCGAGTTCGAA
TCCCGCCGCCCCGACCA
Downstream region at tRNA end position 
tgaatccaaa
Secondary structure (Cloverleaf model)
>SRA1001832	Pro	GGG
                   t      ACCA tgaatccaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | |   |     G
    C       C G C G       G C G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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