The detailed information of tRNA gene sequence


Sequence ID>SRA1001838
Genome IDSRR001308.83673
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 175
End posion on genome 251
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gctccaaatt
tRNA gene sequence 
GGGGGGTTAGCTCAGTTGGCTAGAGCATCTGCCTTGCACGTAGAGGGTCATCGGTTCGAC
TCCGATATCCTCCACAA
Downstream region at tRNA end position 
taaannnnnn
Secondary structure (Cloverleaf model)
>SRA1001838	Ala	TGC
                   t      ACAA taaannnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     G + T
                     T - A          T C
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G + T
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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