The detailed information of tRNA gene sequence


Sequence ID>SRA1001842
Genome IDSRR001308.86628
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 39
End posion on genome 129
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcctccactt
tRNA gene sequence 
GGAGAGGTGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTTCAGGATAATATCCT
GACGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
agaattcccc
Secondary structure (Cloverleaf model)
>SRA1001842	Ser	GGA
                   t      GCCA agaattcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TTCAGGATAATATCCTGAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK