The detailed information of tRNA gene sequence


Sequence ID>SRA1001847
Genome IDSRR001308.88107
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 217
End posion on genome 142
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gaaaccgatc
tRNA gene sequence 
GGGACGTTAGCTCAGTTGGTAGAGCAGCGGACTTTTAATCCGTTGGTCACAAGTTCGAAT
CTTGTACGTCCTACCA
Downstream region at tRNA end position 
ctctacgaaa
Secondary structure (Cloverleaf model)
>SRA1001847	Lys	TTT
                   c      ACCA ctctacgaaa
                     G + T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     T - A          T A
                    T     T G T T C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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