The detailed information of tRNA gene sequence


Sequence ID>SRA1001849
Genome IDSRR001308.89703
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 224
End posion on genome 150
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tcaaagcttt
tRNA gene sequence 
GCTGCCGTAGCTCAGTGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCGAGAGTTCAATCC
CCTCCGGCAGCACCA
Downstream region at tRNA end position 
tttaaccctc
Secondary structure (Cloverleaf model)
>SRA1001849	Thr	GGT
                   t      ACCA tttaaccctc
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     C T C C C     A
        G A        A      | | |   |     A
      T     C T C G       G A G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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