The detailed information of tRNA gene sequence


Sequence ID>SRA1001850
Genome IDSRR001308.90744
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 111
End posion on genome 185
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaaagcatct
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACGCGGCCCTTTCACGGCTGAAACACGGGTTCGATTC
CCGTAGGGGTCACCA
Downstream region at tRNA end position 
gcattttggc
Secondary structure (Cloverleaf model)
>SRA1001850	Glu	TTC
                   t      ACCA gcattttggc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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