The detailed information of tRNA gene sequence


Sequence ID>SRA1001853
Genome IDSRR001308.91213
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 175
End posion on genome 252
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
tttaagccct
tRNA gene sequence
CGGGGTGTAGCGTAGCCCGGTTATCGCGCCTGCTTTGGGAGCAGGAGGCCGCAGGTTCGA
ATCCTGCCACCCCGACAA
Downstream region at tRNA end position
agaaatcctt
Secondary structure (Cloverleaf model)
>SRA1001853	Pro	TGG
                   t      ACAA agaaatcctt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
    C C G A        A      | | | | |     G
  C         T G C G       G C A G G     C
  G           | | |                 T T
  G         T C G C
    T T A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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