The detailed information of tRNA gene sequence


Sequence ID>SRA1001854
Genome IDSRR001308.92821
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 2
End posion on genome 89
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position
nnnnnnnnnc
tRNA gene sequence
GCATGCGTGGCAGAGCGGCAAACGCTCGGCGCTGTAGACGCCGCGCCCATCCCGGGCTTC
GCAGGTTCGAGTCCTGCCGCATGCACCA
Downstream region at tRNA end position
tttctgaccc
Secondary structure (Cloverleaf model)
>SRA1001854	Tyr	GTA
                   c      ACCA tttctgaccc
                     G - C
                     C - G
                     A - T
                     T - A
                     G - C
                     C - G
                     G - C          T G
                    T     C G T C C     A
      C G A        G      | | | | |     G
    G       G A C G       G C A G G     C
    G           | |                 T T
    C       A C G C
      A A          T     CGCCCATCCCGGGCTTC
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  C       A
                  T       G
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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