The detailed information of tRNA gene sequence


Sequence ID>SRA1001855
Genome IDSRR001308.92951
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 127
End posion on genome 203
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgaccggctc
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAG
ACCAACCAGACCCACCA
Downstream region at tRNA end position 
ttcctccatc
Secondary structure (Cloverleaf model)
>SRA1001855	Ile	GAT
                   c      ACCA ttcctccatc
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          A G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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