The detailed information of tRNA gene sequence


Sequence ID>SRA1001856
Genome IDSRR001308.93645
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 93
End posion on genome 169
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccggccacgc
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
agcattcttg
Secondary structure (Cloverleaf model)
>SRA1001856	Asp	GTC
                   c      GCCA agcattcttg
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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