The detailed information of tRNA gene sequence


Sequence ID>SRA1001858
Genome IDSRR001308.93949
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 259
End posion on genome 166
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
nnnnnnggct
tRNA gene sequence 
GCCCGGGTGGTGAAATTGGTAGACACAGCGGACTTAAAATCCGCCGCTTACCTGCATAAG
GGGCGTACCGGTTCGATTCCGGTTCCGGGCACCA
Downstream region at tRNA end position 
gctaatcagc
Secondary structure (Cloverleaf model)
>SRA1001858	Leu	TAA
                   t      ACCA gctaatcagc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G + T          T T
                    T     T G G C C     A
      T A A        G      | | | | |     G
    T       A G T G       A C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGCTTACCTGCATAAGGGGCGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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