The detailed information of tRNA gene sequence


Sequence ID>SRA1001862
Genome IDSRR001308.96549
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 112
End posion on genome 36
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcaaggtatt
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
aggtaaacgc
Secondary structure (Cloverleaf model)
>SRA1001862	Asp	GTC
                   t      GCCA aggtaaacgc
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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