The detailed information of tRNA gene sequence


Sequence ID>SRA1001864
Genome IDSRR001308.97294
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 179
End posion on genome 103
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttcgcgaagt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCATCTGCCTGGGGGGCAGAGGGTCGTCGGTTCGAA
TCCGGCCGTCCCGACCA
Downstream region at tRNA end position 
attcgcggaa
Secondary structure (Cloverleaf model)
>SRA1001864	Pro	GGG
                   t      ACCA attcgcggaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | + | | |     G
    C       C G C G       G T C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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