The detailed information of tRNA gene sequence


Sequence ID>SRA1001867
Genome IDSRR001308.98178
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 131
End posion on genome 207
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cggggttgaT
tRNA gene sequence 
AGGTCAGTAGCTCAATCGGTAGAGCAGCGGATTCCAAATCCGCAGGTCGTGGGTTCGATT
CCCTCCTGGCCTGCCC
Downstream region at tRNA end position 
ctttctccca
Secondary structure (Cloverleaf model)
>SRA1001867	Trp	CCA
                   T      GCCC ctttctccca
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      |   | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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