The detailed information of tRNA gene sequence


Sequence ID>SRA1001869
Genome IDSRR001308.100113
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 126
End posion on genome 51
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
acgcgggtga
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTAGAGCATCTCGTTTACACCGAGAGGGTCGGCGGTTCGAGC
CCGTCATCGCCCACCA
Downstream region at tRNA end position 
tcctgcttcg
Secondary structure (Cloverleaf model)
>SRA1001869	Val	TAC
                   a      ACCA tcctgcttcg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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