The detailed information of tRNA gene sequence


Sequence ID>SRA1001876
Genome IDSRR001308.105433
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 165
End posion on genome 238
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcttgaatga
tRNA gene sequence 
GGCCTCGTGGCGGAGTGGTGACGCAGAGGACTGCAAATCCTTGCACCCCGGTTCGATTCC
GGGCGAGGCCTCCA
Downstream region at tRNA end position 
aaatccgcgg
Secondary structure (Cloverleaf model)
>SRA1001876	Cys	GCA
                   a      TCCA aaatccgcgg
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     G G G C C     A
        G A        G      | | | | |     G
      T     G G C G       C C C G G     C
      G       | | |                 T T
      G     A C G C
        T G        A     GCAC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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