The detailed information of tRNA gene sequence


Sequence ID>SRA1001877
Genome IDSRR001308.106172
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 25
End posion on genome 100
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctccctgcgc
tRNA gene sequence 
GGGGGTGTAGCTCAGTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCAAGT
CCCGTCATCCTCGCCA
Downstream region at tRNA end position 
tctatgtgcc
Secondary structure (Cloverleaf model)
>SRA1001877	Asp	GTC
                   c      GCCA tctatgtgcc
                     G - C
                     G + T
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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