The detailed information of tRNA gene sequence


Sequence ID>SRA1001878
Genome IDSRR001308.106172
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 108
End posion on genome 183
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ccatctatgt
tRNA gene sequence 
GCCGCGGTAGCTCAGTTGGTAGAGCAAAGCACTGAAAATGCTTGGGTCGCCGGTTCGAGT
CCGGCTTGCGGCACCA
Downstream region at tRNA end position 
ccccttctct
Secondary structure (Cloverleaf model)
>SRA1001878	Phe	GAA
                   t      ACCA ccccttctct
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G + T
                     G + T          T G
                    T     C G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK