The detailed information of tRNA gene sequence


Sequence ID>SRA1001880
Genome IDSRR001308.107486
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 96
End posion on genome 20
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcacacaaat
tRNA gene sequence 
CGGGGTGTAGCTTAGTCAGGTAAAGCGCTACGTTCGGGACGTAGAGACCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
gatggagtcc
Secondary structure (Cloverleaf model)
>SRA1001880	Pro	CGG
                   t      ACCA gatggagtcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     G
    C       T T C G       G G A G G     C
    A       | | | |                 T T
    G       A A G C
      G T A        G     AGACC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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