The detailed information of tRNA gene sequence


Sequence ID>SRA1001882
Genome IDSRR001308.108705
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 170
End posion on genome 95
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tggcagacac
tRNA gene sequence 
GGGCTCGGATCTCGAGCGGCAGAGGCGGCGGTTCTTACCCGCCACGGTGAGGGTTCAAGT
CCCTCCGGGCCCACCG
Downstream region at tRNA end position 
gcgccacgcg
Secondary structure (Cloverleaf model)
>SRA1001882	Lys	CTT
                   c      ACCG gcgccacgcg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T G
                    G     C T C C C     A
      G A G        A      | | | | |     A
    C       C T C T       G A G G G     C
    G       | | | +                 T T
    G       G A G G
      C A          C     ACGGT
                    G - C
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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