The detailed information of tRNA gene sequence


Sequence ID>SRA1001885
Genome IDSRR001308.108939
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 129
End posion on genome 205
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcgtttcggt
tRNA gene sequence 
CGGGGAGTAGCTCAGCCTGGTAGAGCACTGTCTTCGGGAGGCAGGGGCCGGAGGTTCGAA
TCCTCTCTCCCCGACCA
Downstream region at tRNA end position 
tatttctttg
Secondary structure (Cloverleaf model)
>SRA1001885	Pro	CGG
                   t      ACCA tatttctttg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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