The detailed information of tRNA gene sequence


Sequence ID>SRA1001888
Genome IDSRR001308.111834
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 167
End posion on genome 92
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tggatgggtt
tRNA gene sequence 
GCCTCGGTAGCTCAGTTGGTAGAGCAGTTGACTCTTAATCAATTGGTCGTCGGTTCGAAT
CCGGCCCGGGGCACCA
Downstream region at tRNA end position 
cttttttctc
Secondary structure (Cloverleaf model)
>SRA1001888	Lys	CTT
                   t      ACCA cttttttctc
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C G G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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