The detailed information of tRNA gene sequence


Sequence ID>SRA1001890
Genome IDSRR001308.112274
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 239
End posion on genome 163
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tcgagagtta
tRNA gene sequence 
GGGCTCGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGAGGTTCGAG
TCCTCCCGGGCCCACCA
Downstream region at tRNA end position 
ttcactggta
Secondary structure (Cloverleaf model)
>SRA1001890	Ile	GAT
                   a      ACCA ttcactggta
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T G
                    T     C C T C C     A
      G G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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