The detailed information of tRNA gene sequence


Sequence ID>SRA1001894
Genome IDSRR001308.114029
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 147
End posion on genome 222
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aagcattaat
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGATC
CCGACAGGCTCCACCA
Downstream region at tRNA end position 
ctaagcgcga
Secondary structure (Cloverleaf model)
>SRA1001894	Ala	TGC
                   t      ACCA ctaagcgcga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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