The detailed information of tRNA gene sequence


Sequence ID>SRA1001901
Genome IDSRR001308.116691
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 79
End posion on genome 3
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ggcgaacttt
tRNA gene sequence 
GCGCCCGTAGCTCAATCGGATAGAGCATCGGCCTTCTAAGCCGACGGTTGCAGGTTCGAG
TCCTGTCGGGCGCGCCA
Downstream region at tRNA end position 
ccnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001901	Arg	TCT
                   t      GCCA ccnnnnnnnn
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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