The detailed information of tRNA gene sequence


Sequence ID>SRA1001903
Genome IDSRR001308.117113
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 96
End posion on genome 24
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcacttttaa
tRNA gene sequence 
GCACTAATAGCTCAATGGTTAGAGCGTCTTTCTCATAAAAAGAGGGTTACAGGTTCGAGT
CCTGTTTGGTGCAttt
Downstream region at tRNA end position 
tacgaacttt
Secondary structure (Cloverleaf model)
>SRA1001903	Met	CAT
                   a      Attt tacgaacttt
                     G - C
                     C - G
                     A - T
                     C - G
                     T + G
                     A - T
                     A - T          T G
                    T     T G T C C     A
      T A A        A      | | | | |     G
    G       C T C G       A C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     GGGTT
                    T - A
                    C - G
                    T - A
                    T - A
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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