The detailed information of tRNA gene sequence


Sequence ID>SRA1001907
Genome IDSRR001308.119870
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 184
End posion on genome 109
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccaccatcat
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTATTCTCCACCA
Downstream region at tRNA end position 
tatatactat
Secondary structure (Cloverleaf model)
>SRA1001907	Ala	TGC
                   t      ACCA tatatactat
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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