The detailed information of tRNA gene sequence


Sequence ID>SRA1001908
Genome IDSRR001308.120519
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 210
End posion on genome 121
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agcgggcggc
tRNA gene sequence 
GGAGTGGTGGCCGAGTGGTCGAAGGCACACCCCTGCTAAGGGTGCAGGCGGGGAACCGCC
TCGAGGGTTCGAATCCCTTCCACTCCGCCA
Downstream region at tRNA end position 
ttttatgtaa
Secondary structure (Cloverleaf model)
>SRA1001908	Ser	GCT
                   c      GCCA ttttatgtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CAGGCGGGGAACCGCCTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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