The detailed information of tRNA gene sequence


Sequence ID>SRA1001911
Genome IDSRR001308.123083
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 155
End posion on genome 80
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agcggcaagc
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGATC
CCGTCATCCTCCACCA
Downstream region at tRNA end position 
ctttcgataa
Secondary structure (Cloverleaf model)
>SRA1001911	Ala	TGC
                   c      ACCA ctttcgataa
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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