The detailed information of tRNA gene sequence


Sequence ID>SRA1001919
Genome IDSRR001308.131339
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 236
End posion on genome 160
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagcttcagt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAAGTTCAAA
TCTTGCCCCCGCAACCA
Downstream region at tRNA end position 
agaaatatga
Secondary structure (Cloverleaf model)
>SRA1001919	Met	CAT
                   t      ACCA agaaatatga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T T C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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