The detailed information of tRNA gene sequence


Sequence ID>SRA1001920
Genome IDSRR001308.132659
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 142
End posion on genome 56
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ccttgtgctt
tRNA gene sequence 
GCCCCTGTGGCGGAACTGGTAGACGCGGCAGACTCAAAATCTGTTATCGGCAACGATGTG
GGAGTTCGATTCTCTTCGGGGGCACCA
Downstream region at tRNA end position 
tcttttggct
Secondary structure (Cloverleaf model)
>SRA1001920	Leu	CAA
                   t      ACCA tcttttggct
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     T T C T C     A
      C A A        G      + + | | |     G
    T       G G C G       G G G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TATCGGCAACGATGT
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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