The detailed information of tRNA gene sequence


Sequence ID>SRA1001925
Genome IDSRR001308.134955
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 134
End posion on genome 58
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ggacaaactc
tRNA gene sequence 
AGGCGCGTAGCTCAGCTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAG
TCCAATCGCGCCTACCA
Downstream region at tRNA end position 
attccaattc
Secondary structure (Cloverleaf model)
>SRA1001925	Val	GAC
                   c      ACCA attccaattc
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     T A A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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