The detailed information of tRNA gene sequence


Sequence ID>SRA1001928
Genome IDSRR001308.136520
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 17
End posion on genome 93
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcagtcggct
tRNA gene sequence 
GGGCCTGTAGCTCAGCTGGCTAGAGCACGCGCTTGATAAGCGCGGGGTCGATAGTTCGAT
CCTATCCAGGCCCACCA
Downstream region at tRNA end position 
actgagcctc
Secondary structure (Cloverleaf model)
>SRA1001928	Ile	GAT
                   t      ACCA actgagcctc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          C T
                    T     C T A T C     A
      C G A        A      | | | | |     G
    T       C T C G       G A T A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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