The detailed information of tRNA gene sequence


Sequence ID>SRA1001930
Genome IDSRR001308.136857
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 149
End posion on genome 73
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gctcttaagt
tRNA gene sequence 
AGGCGCGTAGCTCAGCTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAG
TCCAATCGCGCCTACCA
Downstream region at tRNA end position 
aaaatctagc
Secondary structure (Cloverleaf model)
>SRA1001930	Val	GAC
                   t      ACCA aaaatctagc
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     T A A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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