The detailed information of tRNA gene sequence


Sequence ID>SRA1001937
Genome IDSRR001308.140739
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 61
End posion on genome 137
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctctggtga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
tcataatttg
Secondary structure (Cloverleaf model)
>SRA1001937	Met	CAT
                   a      ACCA tcataatttg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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