The detailed information of tRNA gene sequence


Sequence ID>SRA1001951
Genome IDSRR001308.145059
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 178
End posion on genome 265
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaccttgcgc
tRNA gene sequence 
GGAGAGGTGCGAGAGCGGCCGAATCGGACGGTCTCGAAAACCGTTGTCCTGAAAGGGACC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ccgaaagtgn
Secondary structure (Cloverleaf model)
>SRA1001951	Ser	CGA
                   c      GCCA ccgaaagtgn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    C       A T C G
      C G A        G     TGTCCTGAAAGGGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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