The detailed information of tRNA gene sequence


Sequence ID>SRA1001952
Genome IDSRR001308.145657
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 26
End posion on genome 101
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
acacgttatg
tRNA gene sequence 
GTGGATGTAGCTCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTTGTCGCGGGTTCGAAT
CCCGTCATTCACCCCA
Downstream region at tRNA end position 
actttaaaaa
Secondary structure (Cloverleaf model)
>SRA1001952	His	GTG
                   g      CCCA actttaaaaa
                     G - C
                     T - A
                     G - C
                     G + T
                     A - T
                     T - A
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     TTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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