The detailed information of tRNA gene sequence


Sequence ID>SRA1001954
Genome IDSRR001308.145855
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 54
End posion on genome 130
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cttagttctt
tRNA gene sequence 
GGATCGGTAGTTCAGCTGGTTAGAATGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCCGGTCCGCAA
Downstream region at tRNA end position 
aaacgaacaa
Secondary structure (Cloverleaf model)
>SRA1001954	Asp	GTC
                   t      GCAA aaacgaacaa
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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