The detailed information of tRNA gene sequence


Sequence ID>SRA1001959
Genome IDSRR001308.149018
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 67
End posion on genome 141
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
acactaaacc
tRNA gene sequence 
GGGGGGTTAGCTCAGTTGGCTAGAGCATCTGCCTTGCACGCAGAGGGTCATCGGTTCGAC
TCCGATATCCTCCACag
Downstream region at tRNA end position 
gtattagccg
Secondary structure (Cloverleaf model)
>SRA1001959	Ala	TGC
                   c      ACag gtattagccg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     G + T
                     T - A          T C
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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