The detailed information of tRNA gene sequence


Sequence ID>SRA1001960
Genome IDSRR001308.149161
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 77
End posion on genome 150
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acgcatacaa
tRNA gene sequence 
GGCGCGGTAGCAAAGCGGTTATGCCCCGGATTGCAAATCCGGTTAGTCCGGTTCGACTCC
GGACCGCGCCTCCA
Downstream region at tRNA end position 
ctcaagcccg
Secondary structure (Cloverleaf model)
>SRA1001960	Cys	GCA
                   a      TCCA ctcaagcccg
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T C
                    T     A G G C C     A
        G A        A      | | | | |     G
      C     A A C G       T C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        C     TTAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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