The detailed information of tRNA gene sequence


Sequence ID>SRA1001962
Genome IDSRR001308.149516
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 82
End posion on genome 173
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttgatcatga
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTGAAAAGCACCGGTCTTGAAAACCGGAGTGGGGGGCAACCC
CACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttttagagga
Secondary structure (Cloverleaf model)
>SRA1001962	Ser	TGA
                   a      GCCA ttttagagga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G C G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  T           | | |                 T T
  T         A A G C
    G A A          A     AGTGGGGGGCAACCCCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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